22-Title: Study of genetic polymorphism of DGAT1 gene in Gaolao cattle
Authors: Mrunal More, SV Kuralkar, PS Bankar, Prajakta Kuralkar and SG Deshmukh
Source: Ruminant Science (2022)-11(2):361-364.
How to cite this manuscript: More Mrunal, Kuralkar SV, Bankar PS, Kuralkar Prajakta and Deshmukh SG (2022). Study of genetic polymorphism of DGAT1 gene in Gaolao cattle. Ruminant Science 11(2):361-364.
Abstract
The present study was designed to investigate the polymorphism of DGAT1 gene (411bp of Exon VIII) and to assess its association with milk yield traits in Gaolao cattle of Maharashtra. Data on daily milk yield, total milk yield, Fat and SNF was collected from unrelated 32 lactating Gaolao cows maintained at Bull Mother Farm, Pohara Dist. Amravati, Maharashtra. A reported primer with Forward primer- 5’-GCACCATCCTCTTCCTCAAG-3’ and Reverse primer- 5’-GGAAGCGCTTTCGGATG-3’ were selected for PCR-RFLP and the amplified fragment was digested using Eae1 restriction enzyme. The Eae1 restriction endonuclease detected a specific restriction pattern in all 32 Gaolao cows indicating uncut fragment indicating band size as 411 bp of DGAT1 gene, which exhibited a monomorphic pattern (KK) lacking restriction site. The frequency of observed genotypes AA, KK and KA was estimated as 0, 1, and 0 respectively and accordingly, the gene frequency for K allele was estimated as 1 in the studied Gaolao population. The association of the DGAT1 gene with milk traits in Gaolao cattle cannot be investigated due to the observed monomorphic pattern. The overall least squares mean for daily milk yield, total milk yield, Fat and SNF in Gaolao cattle were 1.06±0.15 kg, 195.25±21.0 kg, 3.45±0.13 per cent and 7.34±0.11 per cent, respectively. The effect of lactation length, parity and season of calving were observed as non-significant sources of variation for all studied milk traits in Gaolao. The present investigation revealed a monomorphic pattern for KK genotype with respect to locus 411 bp of DGAT1 gene in the studied Gaolao population, which was suggesting the complete absence of ‘A allele’ and fixation of ‘K allele’.
References
Agrawal VK (2017). Study on genetic variation in milk genes and their association with milk performance traits in indigenous cattle breeds. MVSc thesis submitted to Rajasthan University of Veterinary and Animal Sciences, Bikaner.
Bankar PS (2020). Study of polymorphism in candidate milk protein genes and their association with milk traits in Gaolao breed of cattle. PhD thesis submitted to Maharashtra Animal and Fishery Sciences University, Nagpur.
Bhajantri Shankarappa, Jayashankar MR, Nagaraja R, Rajeshwari YB, Krishnaswamy A, Prasanna SB, Kumar SN and Yathish HM (2018). Association of genetic variation at intronic region of bovine brca1 gene with occurrence of mastitis in HF crossbred cattle. Ruminant Science 7(1):37-41.
Cases S, Smith SJ, Zheng YW, Myers HM, Lear SR, Sande E, Novak S, Collins C, Welch C B and Lusis AJ (1998). Identification of a gene encoding an acyl CoA: diacylglycerol acyltransferase, a key enzyme in triacylglycerol synthesis. Proceeding of the National Academy of Science of the United States of America 95:13018-13023.
Delorenzo MA and Wiggans GR (1986). Factors for estimating daily yield of milk, fat, and protein from a single milking for herds milked twice a day. Journal of Dairy Science 69(9):2386-2394.
Ganguly I, Kumar S, Gaur GK, Singh U, Kumar A, Kumar S and Mann S (2013). DGAT1 polymorphism K232A in Sahiwal (Indian zebu) and Frieswal (Holstein Friesian x Sahiwal crossbred) cattle. Indian Journal of Animal Research 47(4):360-363.
George Jilmil, Kuralkar SV, Ali SA, Bankar PS, Deshmukh SG and Kuralkar Prajakta (2018). Study of polymorphism of kappa casein gene in Marathwadi and Purnathadi buffalo. Ruminant Science 7(2):213-215.
Harvey WR (1990). User’s Guide for LS MLMW, PC-1 version, Mixed Model Least Square and Maximum Likelihood Computer Programme.
ICAR, International Committee for Animal Recording (2017). International Agreement of Recording Practices, Guidelines approved by General Assembly, Section 2:23-89.
Inamdar Basavraj, Naveen Kumar GS, Sudha KV and Yathish HM (2019). Detection of A1 and A2 alleles of beta-casein gene in Amruthmahal cattle. Ruminant Science 8(2):201-203.
Joshi Akshay, Bankar PS, Kuralkar SV, Ali S Sajid, Deshmukh SG and Kuralkar Prajakta (2019). Genetic polymorphism of alpha-lactalbumin and beta-lactoglobulin genes in Marathwadi buffalo. Ruminant Science 8(2):205-208.
Kaur Rajpal, Magotra Ankit, Ramkaran, Gera Sandeep, Kumar Sandeep, Kamaldeep, Garg Asha and Rahul (2018). Identification of candidate K232A polymorphism of DGAT1 gene in Hariana cattle. Ruminant Science 7(1):33-36.
Lacorte GA, Machado MA, Martinez ML, Campos AL, Maciel RP, Verneque RS, Teodoro R L, Peixoto MG, Carvalho MR and Fonseca CG (2006). DGAT1 K232A polymorphism in Brazilian cattle breeds. Genetics and Molecular Research 5(3):475-82.
Looft C, Reinsch N, Karall-Albrecht C, Paul S, Brink M, Thomsen H, Brockmann G, Kuhn C, Schwerin M and Kalm E (2001). A mammary gland EST showing linkage disequilibrium to a milk production QTL on bovine Chromosome 14. Mammalian Genome 12:646-650.
Pantawane SN, Kale DS, Koringa PG and Patil DV (2021). SNPs within exon VIII of DGAT1 gene in Gaolao cattle. International Journal of Current Microbiology Applied Science 10(1):1530-1539.
Sangamesh, Appannavar MM, Yathish HM, Hiremath Vaishali, Kulkarni Shrikant, Ramachandra B and Suranagi MD (2017). Variation in growth hormone gene and its association with growth traits in Osmanabadi goat. Ruminant Science 6(1):79-83.
Sargent FD, Lytton VH and Wall Jr OG (1968). Test interval method of calculating dairy herd improvement association records. Journal of Dairy Science 51(1):170-179.
Shah Ruksana M, Ganai NA, Shanaz S, Sheikh FD, Khan Nusrat N and Hamadani Ambreen (2021). Kappa-casein gene polymorphism and its association with milk production traits in dairy cattle of Kashmir, India. Ruminant Science 10(1):43-48.
Shivashanker, Jayashankar MR, Nagaraja R, Yathiraj S, Rajeshwari YB and Isloor S (2018). Genetic polymorphism of PGLYRP-1 gene and its association with mastitis in Deoni and Holstein Friesian crossbred cows. Ruminant Science 7(2):199-202.
Smith SJ, Cases S, Jensen DR, Chen HC, Sande E, Tow B, Sanan DA, Raber J, Eckel RH and Farese Jr RV (2000). Obesity resistance and multiple mechanisms of triglyceride synthesis in mice lacking DGAT. Nature Genetics 25:87-90.
Tantia MS, Vijh RK, Mishra BP, Kumar STB and Sodhi M (2006). DGAT1 and ABCG2 polymorphism in Indian cattle (Bos indicus) and Buffalo (Bubalus bubalis) breeds. BMC Veterinary Research 2:32.
Wagh RU, Thombre BM and Londhe GK (2019). Studies on productive performance of Gaolao cattle in the breeding tract of Maharashtra. Journal of Pharmacognosy and Phytochemistry 8(5):1667-1670
Winter A, Kramer W, Werner FA, Kollers S, Kata S, Durstewitz G, Buitkamp J, Womack JE, Thaller G and Fries R (2002). Association of a lysine-232/alanine polymorphism in a bovine gene encoding acyl-CoA: triacylglycerol acyltransferase (DGAT1) with variation at a quantitative trait locus for milk fat content. Proceedings of the National Academy of Sciences of the United States of America 99:9300-9305.
Yore Keyolenu, Mayengbam P, Singh NS and Tolenkhomba TC (2020). Bovine pituitary specific transcription factor 1(PIT-1) gene polymorphism in indigenous cattle of North East India vis-a-vis crossbred cattle. Ruminant Science 9(1):87-90.